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Table 1 Amino acid sequences and physicochemical properties of BP100 and BP100-W

From: A short novel antimicrobial peptide BP100-W with antimicrobial, antibiofilm and anti-inflammatory activities designed by replacement with tryptophan

Peptides

Amino acid sequence

Molecular mass (Da)

Net charge

tRb

μHc

Theoretical

Measureda

BP100

KKLFKKILKYL-NH2

1421.9

1420.74

+ 5

17.278

0.847

BP100-W

KKWFKKILKYL-NH2

1494.9

1493.79

+ 5

18.548

0.873

  1. Substituted amino acids are shown in bold and underlined
  2. aMolecular mass was determined using matrix-assisted laser desorption/ionization (MALDI)-time-of-flight (TOF)-mass spectrometry (MS)
  3. bRetention time (tR) was measured using a C-18 reverse phase analytical high-performance liquid chromatography (HPLC) column (5 mm; 4.6 mm × 250 mm; Vydac). The peptides were eluted for 60 min using a linear gradient of 0 − 90% (v/v) acetonitrile in water containing 0.05% (v/v) trifluoroacetic acid (TFA)
  4. cHydrophobicity moment (μH) was calculated online at: http://heliquest.ipmc.cnrs.fr/cgi-bin/ComputParams.py