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Table 1 Proteomic analysis of representative host cell proteins incorporated into virus or virus-like particles

From: Systems biology from virus to humans

Virus

Host proteins in virus or VLP*

Influenza virusa

ADAR3, H2A, HSP90, nucleolin, ITGAV, hnRNPA1, glypican 4 (kglypican), ANXA4, CD9, CD81, cofilin 1, cyclophilin A, profilin, HSP27, integrin beta, ANXA11, CD59

Respiratory syncytial virusb

  

 Cytoskeleton

B-actin, keratin, moesin, filamin-A, TUBA1B, TUBB, HSP70, HSP90-alpha,beta

 Energy pathways

ALPI, PK, GAPDH

 Immune response

Putative annexin A2-like protein, ANXA1, CD55

H5N1 VLPc

ADP-ribosylation factor, alpha tubulin, Arp2/3 complex subunit, beta-tubulin 10, actin, 40S ribosomal protein S24, 60S acidic ribosomal protein P1,2, ribosomal protein L40, HSP90, heterotrimeric G-protein gamma subunit-like protein, putative Rho1, glutathione S-transferase sigma, ATPase subunit C, casein kinase II subunit alpha, fatty acid-binding protein, 14-3-3 zeta, Rbp1-like RNA-binding protein PB

H5N1/H3N1 VLPd

b-tubulin, Myosin, ECM proteins integrin alpha, HSP90, HSP70, HSP27, annexin, tetraspanin, CD9, glycolytic enzymes enolase 1, pyruvate kinase, glyceraldehyde-3-phosphate dehydrogenase, unclassified proteins, aldo-keto reductase family 1, WD repeat domain 1, gamma-glutamyltransferase, peroxiredoxin 2

  1. aInfluenza virus (H1N1,A/Cal/07/2009) was purified after growing in A549 cells (Shaw et al. 2008; Dove et al. 2012).
  2. bRespiratory syncytial virus was purified after growing in A549 cells (Radhakrishnan et al. 2010).
  3. cH5N1 VLPs (H5N1, A/Indonesia/102 5/2005) were purified after expressing in SF9 insect cells (Song et al. 2011).
  4. dH3N2/H5N1 VLPs (H3N2, A/Taiwan/083/2006 and H5N1, A/Hanoi/30408/2005H5N1) were purified after expressing in Vero cells (Wu et al. 2010).
  5. *Adenosine deaminase, RNA-specific, 3 (ADAR3), histone 2A (H2A), heterogeneous nuclear ribonucleoprotein A1 (hnRNP1), tubulin alpha-1B (TUBA1B), tubulin B (TUBB), intestinal type alkaline phosphatase (ALPI), heat shock protein 27 kDa (HSP27) peroxiredoxin (PRX), annexin A 4 (ANXA4), annexin A11 (ANXA11), annexin A11 (ANXA1), integrin alpha V (ITGAV), dynein 1, heat shock protein 90 kDa (HSP90), heat shock protein 70 kDa (HSP70), pyruvate kinase (PK), beta-actin (B-actin), alkaline phosphatase (ALPI), complement decay acceleration factor (CD55), glyceraldehyde-3-phosphate dehydrogenase (GAPDH).